Transcription factories in a Hela cell [from Cook PR (1999) Science 284, 1790]

Nuclear Structure and Function Research Group

GRIDs (for static apps)

Conventional microtiter plates v GRIDs

 
    Microtiter plates are widely used during liquid handling; each is essentially an array of miniature test tubes with 96 (right), 384, or 1,536 wells in a uniform rectangular footprint, where wells have working volumes of ~100-400, ~15-50, or ~3-10 micro-liters, respectively.

A conventional 96-well microtiter plate


    'GRIDs' – our analogs of microtiter plates – can have many fewer, or many more, individual chambers (right). For example, the two top-most ones have 384 and 1,536 chambers on the same footprint as micro-plates, the middle one has 1,024 chambers in a 6 cm dish, and the bottom two chamber densities 1,000 x and 4,000 x those of conventional plates. [Chambers contain dyes; insets show magnifications (the one at second bottom illustrates 3 chambers – two with single human cells).]

    Biologists can make GRIDs with their own media, plates, coatings (important when growing fastidious iPS cells, organs), and use nano-liter volumes rather than the tens of micro-liters consumed in microplates.

    Many workflows in cell biology (e.g., feeding, replating, cloning, cryopreservation, lysis + RT-PCR, transfection + genome editing, and fixation + immunolabeling) have been carried out in GRIDs.

 

Working volumes in GRIDs
Fabrication of GRIDs with fluid walls
    GRIDs are fabricated differently from our circuits by reshaping fluids sitting in a standard Petri dish (right):
• The bottom is covered with a thin film of cell-growth medium.
• An overlay of an immiscible liquid (FC40) prevents evaporation.
• A Teflon “stylus” moves along the bottom. As FC40 wets stylus and
  dish better than media, FC40 runs down to the bottom.
• Moving the stylus sideways draws a line.
• Drawing more lines creates a GRID; neighbouring aqueous chambers
  are separated by 'liquid walls' of FC40.

    The sides of each wall are firmly 'pinned' to the dish by interfacial forces (background). These fluid walls prove to be remarkably robust, withstanding violent agitation (Movie).

Making a GRID
Some movies
Movie: Printing a GRID with fluid walls in seconds
Movie: Adding fluid through a liquid bridge to a chamber with fluid walls
Movie: Adding small volumes quickly to micro-chambers with fluid walls
Movie: A GRID containing with fluid walls survives violent agitation
Movie: Worms living in a GRID with fluid walls
 

Reference
Soitu, C., Feuerborn, A., Tan, A.N., Walker, H., Walsh, P.A., Castrejon-Pita, A.A., Cook, P.R., and Walsh, E.J. (2018). Microfluidic chambers using fluid walls for cell biology. Proc. Natl. Acad. Sci. USA 115, E5926-E5933. [pdf] [large pdf with embedded movies][journal]
Soitu, C., Feuerborn, A., Deroy, C., Castrejón-Pita, A.A., Cook, P.R., and Walsh. E.J. (2019). Raising fluid walls around living cells. Sci. Adv. 5, eaav8002. [pdf] [pdf with embedded movies] [journal]

 

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